Botany · Strategies for Enhancement in Food Production

Plant Breeding for Disease Resistance

Fungal, bacterial and viral pathogens drain crop yields by up to 20–30 per cent, sometimes destroying a harvest entirely. Breeding cultivars that genetically resist these pathogens is a core plant-breeding objective in this chapter. NEET draws steady questions on the two breeding routes — conventional hybridisation and mutation breeding — and on the named resistant varieties such as Himgiri wheat and Pusa Komal cowpea, so the cultivar table is high-yield revision.

NCERT grounding

This subtopic sits in the plant-breeding section of Strategies for Enhancement in Food Production. NCERT opens the discussion plainly: a wide range of fungal, bacterial and viral pathogens affect the yield of cultivated crop species, especially in tropical climates, and crop losses can often be significant — up to 20–30 per cent, or sometimes even total. In this situation, breeding and developing cultivars resistant to disease enhances food production and reduces the dependence on fungicides and bacteriocides.

The textbook then fixes a definition that NEET tests repeatedly. Resistance of the host plant is the ability to prevent the pathogen from causing disease, and it is determined by the genetic constitution of the host plant. Because resistance is a heritable, gene-controlled trait, it can be moved between plants by ordinary sexual crossing — which is exactly why plant breeding can build resistant varieties at all. NCERT also stresses a practical prerequisite: before breeding is undertaken, it is important to know the causative organism and the mode of transmission of the disease.

NCERT (Strategies for Enhancement in Food Production): "Resistance of the host plant is the ability to prevent the pathogen from causing disease and is determined by the genetic constitution of the host plant."

Breeding crops for disease resistance

Disease-resistance breeding is not a separate science from ordinary crop improvement — it is the same toolkit aimed at a particular trait. NCERT is explicit that breeding for disease resistance is carried out either by the conventional breeding techniques described for any agronomic character, or by mutation breeding. Both routes end with a cultivar whose genome carries genes that block a named pathogen, but they differ in where the resistance gene comes from.

The first idea to lock in is the distinction between the pathogen groups. NCERT names representative diseases for each: among the fungal diseases are rusts — such as brown rust of wheat, red rot of sugarcane and late blight of potato; among the bacterial diseases is black rot of crucifers; and among the viral diseases are tobacco mosaic and turnip mosaic. A resistant cultivar is bred against a specific disease, so the variety name, the crop and the pathogen always travel together as a triplet in exam questions.

Three pathogen classes, one breeding strategy. The breeding steps are identical regardless of pathogen group — only the screening assay and the disease example change.

Fungal pathogens

NCERT examples: brown rust of wheat, red rot of sugarcane, late blight of potato.

Resistant cultivar: Himgiri wheat — leaf and stripe rust, hill bunt.

Bacterial pathogens

NCERT example: black rot of crucifers.

Resistant cultivars: Pusa Komal cowpea (bacterial blight); Pusa Shubhra cauliflower (black rot).

Viral pathogens

NCERT examples: tobacco mosaic, turnip mosaic.

Resistant cultivar: Pusa Sadabahar chilli — chilli mosaic virus, TMV, leaf curl.

The two methods answer one question: does a resistance gene already exist somewhere we can reach it? If a resistant plant exists — within the crop itself, in an old landrace, or in a wild relative — conventional hybridisation can pull that gene into a high-yielding background. If no such gene can be found in the available germplasm, the breeder must create new variation, and that is where mutation breeding takes over. NCERT lists the same logic when it notes that conventional breeding is "often constrained by the availability of limited number of disease resistance genes" already present in crop varieties or wild relatives.

Conventional breeding: hybridisation and selection

The conventional method of breeding for disease resistance is hybridisation and selection. NCERT states directly that its steps are essentially identical to those for breeding any other agronomic character such as high yield — the same five-step pipeline used across the chapter, simply pointed at a resistance trait. The textbook gives the sequence as four sequential operations specific to resistance work.

Conventional breeding for disease resistance — NCERT sequence

Hybridisation & selection
  1. Step 1

    Screen germplasm

    Search the germplasm collection — cultivated varieties and wild relatives — for sources of the resistance gene.

    Find the gene
  2. Step 2

    Hybridise selected parents

    Cross the resistant donor with a high-yielding parent so the hybrid combines resistance with yield.

    Combine traits
  3. Step 3

    Select & evaluate hybrids

    From the progeny, pick plants that carry both resistance and yield; self-pollinate to homozygosity.

    Fix the line
  4. Step 4

    Test & release variety

    Trial the new line in research and farmers' fields, then release it as a named cultivar.

    Commercialise

Step 1 is the heart of resistance breeding. The breeder does not invent resistance; it must already exist somewhere in the germplasm collection — the entire collection of plants and seeds carrying all the diverse alleles for a crop. Wild relatives are especially valuable here. NCERT notes that several wild relatives of cultivated species carry useful resistance characters but have very low yield, so the resistance gene must be introduced into a high-yielding cultivated variety rather than the wild plant being grown directly.

Steps 2 and 3 carry out that introduction. Because high-yielding crops and resistant wild relatives are usually different plants, the desired characters have to be combined from two different parents by cross-hybridisation. The pollen of the chosen male parent is placed on the stigma of the female parent; only a small fraction of crosses — often one in a few hundred to a thousand — actually yields the wanted combination, so careful selection of superior recombinants among the progeny is essential. The selected plants are then self-pollinated for several generations until they reach uniformity, so the resistance does not segregate out in later crops.

Figure 1 Transferring a resistance gene into a high-yielding cultivar Wild relative Resistant (R) Low yield Crop cultivar High yield Susceptible (r) × hybridise Hybrid — select & self-pollinate several generations to homozygosity New variety — high yield + resistant (RR)

Figure 1. Conventional disease-resistance breeding transfers a resistance gene from a low-yielding resistant donor into a high-yielding but susceptible cultivar through hybridisation, followed by repeated selfing and selection until a uniform resistant variety is fixed.

Step 4 is the testing-and-release stage common to every crop-improvement programme. The new resistant lines are evaluated for yield and other agronomic traits in research fields under controlled fertiliser, irrigation and crop-management conditions, then tested in farmers' fields for at least three growing seasons across the agroclimatic zones where the crop is grown, always compared against a reference or check cultivar. Only after this is the cultivar released and commercialised. NCERT's worked example of gene transfer is bhindi: resistance to yellow mosaic virus in Abelmoschus esculentus was transferred from a wild species, producing the new variety Parbhani Kranti.

20–30%

Crop loss to pathogens

NCERT states crop losses to fungal, bacterial and viral pathogens are often significant — up to 20–30 per cent, sometimes total. Resistant cultivars both raise yield and cut dependence on fungicides and bacteriocides.

Mutation breeding

Conventional breeding has one hard limit: it can only move resistance genes that already exist. NCERT states the constraint precisely — conventional breeding is often limited by the small number of disease-resistance genes present and identified in crop varieties or wild relatives. When screening the entire available germplasm turns up no usable resistance gene, the breeder must create new variation, and that is the role of mutation breeding.

Mutation is the process by which genetic variation is created through changes in the base sequence within genes, resulting in a new character or trait not found in the parental type. It is possible to induce mutations artificially through the use of chemicals (chemical mutagens) or radiations such as gamma radiation. Plant material is treated with the mutagen, then screened for resistant variants; plants that show the desirable resistant character are selected and used as a source in breeding. This whole process — inducing mutations and selecting the useful ones — is what NCERT calls mutation breeding.

Conventional breeding vs Mutation breeding

Conventional breeding

Existing gene

resistance already present in germplasm

  • Method is hybridisation and selection
  • Resistance gene sourced from a crop variety or wild relative
  • Transfer is by sexual hybridisation, then selection
  • Limited by how many resistance genes exist
VS

Mutation breeding

New gene

resistance created when none exists

  • Mutations induced by chemicals or radiations
  • Treated material screened for resistant variants
  • Useful mutants multiplied directly or used in breeding
  • Used when no resistance gene is available

NCERT's worked example of mutation breeding is mung bean: resistance to yellow mosaic virus and powdery mildew was induced by mutations. This single example covers both a viral disease (yellow mosaic virus) and a fungal disease (powdery mildew), making it an efficient one to memorise. Note carefully that the bhindi case — Parbhani Kranti — is not mutation breeding; there the resistance gene already existed in a wild species and was transferred by hybridisation. NCERT also mentions that beyond mutation breeding, other methods used are selection among somaclonal variants and genetic engineering, but the syllabus core for this subtopic is the conventional-versus-mutation pair.

Why "same crop or related wild species" matters

A subtle point NCERT makes is that all its disease-resistance examples involve resistance genes that lie either in the same crop species being bred, or in a related wild species. Transfer of the resistance gene is achieved by sexual hybridisation between the target plant and the source plant, followed by selection. This is precisely why conventional breeding cannot reach beyond the crossing barrier — and why mutation breeding becomes necessary when even the wild relatives lack a usable gene.

Resistant cultivars to memorise

The single most exam-relevant block of this subtopic is NCERT Table 9.1 — the list of crop varieties bred by hybridisation and selection for resistance to fungal, bacterial and viral diseases. NEET frequently asks students to match a variety to its crop or to its disease, so the full triplet of crop, variety and pathogen must be memorised exactly.

NCERT Table 9.1 — Crop varieties bred for disease resistance
CropVarietyResistance to diseasePathogen type
WheatHimgiriLeaf rust, stripe rust, hill buntFungal
BrassicaPusa Swarnim (Karan rai)White rustFungal
CauliflowerPusa Shubhra, Pusa Snowball K-1Black rot and curl blight black rotBacterial
CowpeaPusa KomalBacterial blightBacterial
ChilliPusa SadabaharChilli mosaic virus, tobacco mosaic virus, leaf curlViral

Two cross-checks help avoid confusion. First, Pusa Swarnim is the same variety as Karan rai — NCERT lists them together — and it is a Brassica resistant to white rust, a fungal disease. Second, cauliflower carries two named varieties, Pusa Shubhra and Pusa Snowball K-1, both bred against black rot, a bacterial disease of crucifers. Chilli's Pusa Sadabahar is the only purely viral example in the table, resisting three viral problems at once: chilli (chilly) mosaic virus, tobacco mosaic virus and leaf curl.

Figure 2 Resistant cultivars grouped by pathogen type FUNGAL Wheat — Himgiri leaf & stripe rust, hill bunt Brassica — Pusa Swarnim white rust BACTERIAL Cauliflower — Pusa Shubhra black rot Cowpea — Pusa Komal bacterial blight VIRAL Chilli — Pusa Sadabahar chilli mosaic virus, tobacco mosaic virus, leaf curl

Figure 2. The five NCERT resistant cultivars grouped by pathogen type. Wheat Himgiri and Brassica Pusa Swarnim resist fungal diseases; cauliflower Pusa Shubhra and cowpea Pusa Komal resist bacterial diseases; chilli Pusa Sadabahar resists viral diseases.

One mnemonic anchor helps: every variety in the table except Himgiri begins with "Pusa", reflecting its development at the Indian Agricultural Research Institute (Pusa, New Delhi). Himgiri — the wheat variety against leaf rust, stripe rust and hill bunt — is the lone non-Pusa name, which makes it the most commonly tested single entry.

A resistant cultivar is bred against named pathogens — the variety, the crop and the disease must always be recalled as one set.

Disease-resistance breeding — exam principle

Worked examples

Worked example 1

Himgiri, a variety of wheat developed by plant breeding, is resistant to which of the following set of diseases?

Solution. Himgiri is the NCERT wheat variety bred by hybridisation and selection for resistance to leaf rust, stripe rust and hill bunt. Leaf rust and stripe rust are fungal rust diseases of wheat; hill bunt is also a fungal disease. Himgiri is therefore an example of breeding for resistance to fungal pathogens.

Worked example 2

In which crop was resistance to yellow mosaic virus and powdery mildew induced by mutations, and what is this breeding method called?

Solution. In mung bean, resistance to yellow mosaic virus and powdery mildew was induced by mutations. The method is mutation breeding — mutations are induced artificially using chemicals or radiations such as gamma rays, and plants showing the desirable resistant character are selected. It is used when no resistance gene exists in the available germplasm.

Worked example 3

The new variety Parbhani Kranti of bhindi (Abelmoschus esculentus) was developed for resistance to yellow mosaic virus. Was it produced by mutation breeding?

Solution. No. Parbhani Kranti was not a product of mutation breeding. The resistance gene to yellow mosaic virus already existed in a wild species of Abelmoschus; it was transferred into cultivated bhindi by sexual hybridisation followed by selection — that is, conventional breeding. Mutation breeding would be needed only if no resistance gene existed in any crossable plant.

Worked example 4

Arrange the conventional breeding steps for disease resistance in the correct sequence: hybridisation of selected parents; testing and release of new varieties; screening germplasm for resistance sources; selection and evaluation of hybrids.

Solution. The NCERT sequence is: (1) screening germplasm for resistance sources, (2) hybridisation of selected parents, (3) selection and evaluation of the hybrids, and (4) testing and release of new varieties. The gene must first be located in the germplasm before any crossing can begin.

Common confusion & NEET traps

Disease-resistance breeding generates a cluster of look-alike facts: two breeding methods, three pathogen groups, and five named cultivars that all share the "Pusa" prefix except one. NEET exploits exactly these overlaps, so a few distinctions are worth fixing firmly.

NEET PYQ Snapshot — Plant Breeding for Disease Resistance

Concept-style questions on the two breeding methods and the NCERT resistant cultivars.

Concept

The wheat variety bred by plant breeding and resistant to leaf rust, stripe rust and hill bunt is:

  1. Pusa Swarnim
  2. Himgiri
  3. Pusa Sadabahar
  4. Pusa Komal
Answer: (2)

Why: Himgiri is the NCERT wheat variety resistant to leaf rust, stripe rust and hill bunt — all fungal diseases. Pusa Swarnim is Brassica, Pusa Sadabahar is chilli, and Pusa Komal is cowpea.

Concept

In which crop was resistance to yellow mosaic virus and powdery mildew induced by mutation breeding?

  1. Cowpea
  2. Cauliflower
  3. Mung bean
  4. Chilli
Answer: (3)

Why: NCERT states that in mung bean, resistance to yellow mosaic virus and powdery mildew was induced by mutations. Mutation breeding is used when no resistance gene exists in the available germplasm.

Concept

Which of the following is the correct sequence of conventional breeding for disease resistance?

  1. Hybridisation → screening germplasm → testing → selection
  2. Screening germplasm → hybridisation of parents → selection of hybrids → testing and release
  3. Selection → hybridisation → screening germplasm → release
  4. Testing and release → hybridisation → screening germplasm → selection
Answer: (2)

Why: The resistance gene must first be located by screening the germplasm; only then are selected parents hybridised, the hybrids selected and evaluated, and finally the new variety tested and released.

FAQs — Plant Breeding for Disease Resistance

Quick answers to the most common doubts on disease-resistance breeding.

What are the two main methods of breeding crops for disease resistance?

Breeding for disease resistance is carried out by conventional breeding techniques and by mutation breeding. The conventional method uses hybridisation and selection — its steps are screening germplasm for resistance sources, hybridisation of selected parents, selection and evaluation of the hybrids, and testing and release of new varieties. Mutation breeding induces mutations through chemicals or radiations and then screens the material for resistance when no resistance gene exists in the available germplasm.

Which wheat variety is resistant to leaf rust, stripe rust and hill bunt?

Himgiri is the wheat variety bred by hybridisation and selection that is resistant to leaf rust and stripe rust (both fungal) and hill bunt. It is the standard NCERT example of a crop variety developed for resistance to fungal diseases.

When is mutation breeding used instead of conventional breeding?

Conventional breeding is limited by the number of disease-resistance genes already present in crop varieties and their wild relatives. When no resistance gene exists in the available germplasm, breeders induce mutations artificially using chemicals or radiations such as gamma rays, then screen the treated material for resistant variants. In mung bean, resistance to yellow mosaic virus and powdery mildew was induced by mutations.

What does host resistance to a pathogen mean?

Resistance of the host plant is the ability to prevent the pathogen from causing disease, and it is determined by the genetic constitution of the host plant. Because resistance is genetically governed, it can be transferred from a resistant donor to a high-yielding cultivar by sexual hybridisation followed by selection.

Which crop variety is resistant to chilli mosaic virus, tobacco mosaic virus and leaf curl?

Pusa Sadabahar is the chilli variety bred by hybridisation and selection that is resistant to chilli mosaic virus, tobacco mosaic virus and leaf curl. It is the NCERT example of a cultivar developed for resistance to viral diseases.

Why must resistance from wild relatives be transferred into high-yielding cultivars?

Several wild relatives of cultivated crops carry useful resistance genes but have very low yield. The resistance gene must therefore be moved into a high-yielding cultivar. This is done by sexual hybridisation between the target and source plant followed by selection — for example, resistance to yellow mosaic virus in bhindi was transferred from a wild species, giving the variety Parbhani Kranti.